
Archaea, bacteria, and fungi are all microorganisms, but they are not the same. Archaea are classified within the domain Archaea, while bacteria are classified within the domain Bacteria. Fungi, on the other hand, are classified as eukaryotic organisms, which include mushrooms, yeasts, and molds. Yeasts, such as Saccharomyces cerevisiae, are unicellular fungi known for their ability to ferment carbohydrates, producing alcohol and carbon dioxide, which are used in bread-making and brewing. Mushrooms are larger structures formed by fungi that grow in soil or on damp logs. While archaea and fungi are distinct, they can be found together in some environments, such as in the human gut microbiome, where yeast-like fungi have been detected in human stool samples since 1917.
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What You'll Learn

Archaea and yeast are distinct domains both containing microorganisms
Archaea and yeast are distinct domains, with the former being a domain of microorganisms, while the latter is a type of unicellular fungus classified under the Eukarya domain.
Archaea are single-celled organisms that thrive in extreme environments, such as hot springs, hydrothermal vents, and obsidian pools. They are genetically distinct from bacteria and eukaryotes, with unique proteins and membrane structures. Archaea reproduce through binary fission, have one circular chromosome, and use flagella for movement. Their membranes are composed of branched hydrocarbon chains attached to glycerol by ether linkages, which provides stability and protection from extreme conditions.
On the other hand, yeast is a type of microorganism that belongs to the kingdom Fungi within the Eukarya domain. Yeasts are unicellular fungi known for their ability to ferment carbohydrates, producing alcohol and carbon dioxide. This process is utilized in the production of wine, bread, and other food products. Yeasts have been detected in human stool samples and are believed to play a role in the human intestine.
While archaea and yeast are distinct domains, there are some connections between them. For example, some archaea have been found in common forest mushrooms, suggesting a possible relationship with fungi. Additionally, certain bacterial species exhibit characteristics of both archaea and yeast, such as a bacterium in the order Planctomycetales, which has structural similarities to eukaryotes and a reproduction method resembling that of yeast cells.
In summary, archaea and yeast are distinct domains in the classification of biological organisms, with archaea being a domain of its own and yeast falling under the Eukarya domain as a type of unicellular fungus. Despite their differences, there are instances where the two domains intersect, showcasing the complex nature of microbiology.
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Yeast is a type of fungus
Yeasts are notable for their ability to ferment carbohydrates, producing alcohol and carbon dioxide in products such as wine and bread. They are also used in the production of beer and distilled spirits. Yeasts have been used in biotechnology for this purpose for a long time, and they include some of the most widely used model organisms for genetics and cell biology.
Yeasts have a unique method of reproduction, which is a key characteristic that differentiates them from other forms of eukaryotic unicellular life. When they divide, they do so unequally, by budding a smaller cell from a larger one. This is likely a remnant of a time when yeast was multicellular and made vegetative propagules. Yeasts can also develop multicellular characteristics by forming strings of connected budding cells known as pseudohyphae or false hyphae. They can also quickly evolve into a multicellular cluster with specialised cell organelles.
Yeasts have cell walls that contain chitin, glucan, mannan, lipid, protein, chitosan, acid phosphatase, α-amylase, protease, melanin, and inorganic ions such as phosphorus, calcium, and magnesium. The proportions of these components vary from fungus to fungus.
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Yeast ferments carbohydrates, producing alcohol and carbon dioxide
Yeast is a type of unicellular fungus that has been detected in human stool samples since at least 1917. It is also commonly found in food products such as bread and beer. Yeast plays a vital role in the fermentation of carbohydrates, a process that contributes to the production of a variety of everyday products and helps us understand complex biological systems.
Fermentation of carbohydrates by yeast involves the conversion of sugars into alcohol (ethanol) and carbon dioxide. This process occurs in the absence of oxygen and is, therefore, considered an anaerobic process. The chemical equation for this conversion can be summarised as follows: C6H12O6 + 2 ADP + 2 Pi → 2 C2H5OH + 2 CO2 + 2 ATP.
During fermentation, yeast consumes sugars and produces ethanol and carbon dioxide as waste products. The carbon dioxide forms bubbles, creating a light and airy texture in the final product. This is particularly noticeable in bread dough, where the carbon dioxide produced by yeast causes the dough to rise.
The fermentation process by yeast also influences the flavour of food products by producing acids, alcohols, and esters, which contribute to the overall taste and complexity. Additionally, fermentation can enhance gut health by promoting beneficial bacteria, improving digestion, boosting the immune system, and increasing the bioavailability of vitamins and minerals.
Overall, the ability of yeast to ferment carbohydrates and produce alcohol and carbon dioxide has significant applications in food production, biotechnology, and even biofuel development.
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Archaea is present in mushrooms
Archaea are single-celled microorganisms that were previously classified as bacteria. They are now recognized as a distinct form of life, constituting one of the three great domains of living creatures. Archaea are found in a wide range of habitats, including extreme environments such as hot springs and submarine hydrothermal vents. They play important ecological roles in cold and temperate ecosystems as well.
Archaea are prominent members of the prokaryotic communities colonizing common forest mushrooms. A study found that the ratio of archaeal 16S rRNA gene copy numbers to bacterial ones was greater than 1 in the fruiting bodies of four out of six fungal species examined. This suggests that these mushrooms provide an important habitat for abundant and diverse populations of archaea.
The presence of archaea in mushrooms is not surprising given that archaea are ubiquitous and have been found in various environments, including the human gut. Methanogenic archaea, for example, are present in the digestive systems of some animals, including humans, and play a role in the gut microbiome.
Archaea in mushrooms may have unique characteristics and functions. For example, a study on the fungus Cantharellus cibarius investigated the potential functions of core taxa in different parts of the fungus. The specific contributions of archaea in mushrooms are yet to be fully understood and require further research.
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Mushrooms are classified as fungi
Fungi, like mushrooms, do not contain chlorophyll and are thus incapable of photosynthesis. Instead, they absorb dissolved nutrients from their environment, typically by secreting digestive enzymes. This distinguishes them from plants, which can produce their own food through photosynthesis.
Mushrooms are characterised by their umbrella-shaped sporophores, which are found in the agaric family (Agaricaceae). The sporophore consists of a cap (pileus) and a stalk (stipe), with gills (lamellae) on the underside of the cap. These gills produce microscopic spores, which help the fungus spread.
While the agarics and boletes include most of the forms known as mushrooms, other groups of fungi are also considered mushrooms by laymen. These include the hedgehog mushrooms, which have teeth, spines, or warts on the undersurface of the cap, and the polypores, shelf fungi, or bracket fungi, which have tubes under the cap similar to boletes. Additionally, certain fungi that deviate from the standard morphology of mushrooms have more specific names, such as "puffball," "stinkhorn," and "morel."
The term "mushroom" has a long history and was never precisely defined, leading to variations in its application. However, it generally refers to the fleshy fruiting bodies of some Ascomycota, which are characterised by their gills, stems, and caps.
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Frequently asked questions
Archaea is a domain of organisms that are often similar to bacteria in size and shape. Archaea was initially classified as bacteria and given the name Archaebacteria, but this term has fallen out of use. Archaea has unique properties that separate them from bacteria and eukaryota.
Yeast is a microbe and a type of fungus that is probably one of the earliest domesticated organisms. Yeast microbes convert carbohydrates to carbon dioxide and alcohol through the process of fermentation. The products of this reaction have been used in baking and the production of alcoholic beverages for thousands of years.
Mushrooms are the fleshy, spore-bearing fruiting bodies of a fungus, typically produced above ground on soil or another food source. Mushrooms can be edible, poisonous, or unpalatable.

























